Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_22475 | Not Available | Negative | 5070506 - 5070739 | 9209.63 |
| hypothetical protein | BK654_22480 | Not Available | Negative | 5070729 - 5072102 | 46666.2 |
| hypothetical protein | BK654_22485 | Not Available | Positive | 5072454 - 5072732 | 10533.7 |
| hypothetical protein | BK654_22490 | Not Available | Positive | 5073246 - 5073608 | 13186.6 |
| sam-dependent methyltransferase | BK654_22495 | Not Available | Negative | 5073835 - 5074431 | 21195.2 |
| hypothetical protein | BK654_22500 | Not Available | Positive | 5074773 - 5075468 | 25330.6 |
| hypothetical protein | BK654_22505 | Not Available | Positive | 5075465 - 5076373 | 32547.4 |
| serine/threonine protein kinase | BK654_22510 | Not Available | Negative | 5076430 - 5077359 | 34240.3 |
| protein phosphatase | BK654_22515 | Not Available | Negative | 5077356 - 5078084 | 26376.7 |
| type vi secretion protein vask | BK654_22520 | Not Available | Negative | 5078084 - 5081542 | 130198.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
