Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_22325 | Not Available | Positive | 5035281 - 5035661 | 13702.1 |
| type vi secretion-associated lipoprotein tagq | BK654_22330 | Not Available | Negative | 5035975 - 5036916 | 33165.2 |
| type vi secretion protein | BK654_22335 | Not Available | Negative | 5037002 - 5038729 | 62747.4 |
| hypothetical protein | BK654_22340 | Not Available | Negative | 5038722 - 5039918 | 42447.4 |
| abc transporter atp-binding protein | BK654_22345 | Not Available | Negative | 5039918 - 5040634 | 25388.7 |
| serine/threonine protein kinase | BK654_22350 | Not Available | Negative | 5040634 - 5043735 | 111291.0 |
| serine/threonine protein phosphatase | BK654_22355 | Not Available | Negative | 5043732 - 5044463 | 25995.1 |
| type vi secretion-associated protein | BK654_22360 | Not Available | Negative | 5044464 - 5045117 | 23479.9 |
| type vi secretion protein icmf | BK654_22365 | Not Available | Negative | 5045114 - 5048614 | 129148.0 |
| hypothetical protein | BK654_22370 | Not Available | Negative | 5048611 - 5049921 | 47711.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
