Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | BK654_22125 | Not Available | Negative | 4995842 - 4996252 | 13747.7 |
| xre family transcriptional regulator | BK654_22130 | Not Available | Negative | 4996435 - 4996983 | 19986.0 |
| alanine racemase | BK654_22135 | Not Available | Negative | 4997112 - 4998185 | 38862.0 |
| hypothetical protein | BK654_22140 | Not Available | Negative | 4998283 - 4998636 | 12904.5 |
| d-amino acid dehydrogenase small subunit | BK654_22145 | Not Available | Negative | 4998611 - 4999912 | 47054.8 |
| asnc family transcriptional regulator | BK654_22150 | Not Available | Positive | 5000068 - 5000556 | 18686.8 |
| zinc/iron-chelating domain-containing protein | BK654_22155 | Not Available | Negative | 5000596 - 5000949 | 13061.9 |
| fad-dependent oxidoreductase | BK654_22160 | Not Available | Positive | 5001096 - 5002409 | 47335.9 |
| hypothetical protein | BK654_22165 | Not Available | Negative | 5002599 - 5002844 | 9402.45 |
| gntr family transcriptional regulator | BK654_22170 | Not Available | Positive | 5003024 - 5004457 | 52866.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
