Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | BK654_22025 | Not Available | Positive | 4969476 - 4970180 | 25857.5 |
| hypothetical protein | BK654_22030 | Not Available | Negative | 4970435 - 4970761 | 11424.8 |
| hypothetical protein | BK654_22035 | Not Available | Negative | 4970863 - 4971288 | 15652.7 |
| ammonia channel protein | BK654_22040 | Not Available | Negative | 4971501 - 4972835 | 46016.2 |
| transcriptional regulator | BK654_22045 | Not Available | Negative | 4972869 - 4973207 | 12330.9 |
| hypothetical protein | BK654_22050 | Not Available | Positive | 4973622 - 4973882 | 9452.35 |
| methyl-accepting chemotaxis protein | BK654_22055 | Not Available | Negative | 4973974 - 4975614 | 58207.8 |
| cytochrome c | BK654_22060 | Not Available | Positive | 4976106 - 4977494 | 49608.7 |
| sorbitol dehydrogenase | BK654_22065 | Not Available | Positive | 4977498 - 4978046 | 19698.6 |
| choline dehydrogenase | BK654_22070 | Not Available | Positive | 4978043 - 4979677 | 59971.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
