Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | BK654_21975 | Not Available | Negative | 4959600 - 4960259 | 24308.7 |
| hypothetical protein | BK654_21980 | Not Available | Positive | 4960384 - 4960668 | 10756.5 |
| tigr02647 family protein | BK654_21985 | Not Available | Positive | 4960950 - 4961198 | 8749.49 |
| adenylate cyclase | BK654_21990 | Not Available | Positive | 4961378 - 4964221 | 108722.0 |
| nucleoside diphosphate kinase regulator | BK654_21995 | Not Available | Negative | 4964227 - 4964637 | 14765.6 |
| iron donor protein cyay | BK654_22000 | Not Available | Negative | 4965038 - 4965370 | 12594.5 |
| diaminopimelate decarboxylase | BK654_22005 | Not Available | Positive | 4965756 - 4967003 | 45147.0 |
| diaminopimelate epimerase | BK654_22010 | Not Available | Positive | 4967008 - 4967838 | 30133.3 |
| hypothetical protein | BK654_22015 | Not Available | Positive | 4967852 - 4968577 | 26875.2 |
| tyrosine recombinase xerc | BK654_22020 | Not Available | Positive | 4968580 - 4969479 | 33731.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
