Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoprenoid biosynthesis protein elbb | BK654_21875 | Not Available | Positive | 4938404 - 4939072 | 23394.1 |
| duf188 domain-containing protein | BK654_21880 | Not Available | Negative | 4939197 - 4939652 | 16392.0 |
| cystathionine gamma-synthase | BK654_21885 | Not Available | Negative | 4939767 - 4941665 | 67294.5 |
| hypothetical protein | BK654_21890 | Not Available | Positive | 4941981 - 4943375 | 50581.3 |
| hypothetical protein | BK654_21895 | Not Available | Positive | 4943394 - 4943765 | 13300.2 |
| penicillin-binding protein activator lpob | BK654_21900 | Not Available | Positive | 4943927 - 4944514 | 21519.7 |
| penicillin-binding protein activator lpob | BK654_21905 | Not Available | Positive | 4944518 - 4945261 | 27076.9 |
| threonine transporter rhtb | BK654_21910 | Not Available | Negative | 4945407 - 4946039 | 22688.6 |
| hypothetical protein | BK654_21915 | Not Available | Negative | 4946142 - 4946723 | 21065.4 |
| abc transporter atp-binding protein | BK654_21920 | Not Available | Negative | 4946723 - 4948633 | 71065.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
