Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | BK654_21825 | Not Available | Negative | 4927250 - 4927957 | 25395.7 |
| amino acid abc transporter substrate-binding protein | BK654_21830 | Not Available | Positive | 4928212 - 4928997 | 27985.1 |
| abc transporter permease | BK654_21835 | Not Available | Positive | 4929019 - 4929687 | 24590.7 |
| amino acid abc transporter permease | BK654_21840 | Not Available | Positive | 4929684 - 4930334 | 23500.2 |
| amino acid abc transporter atp-binding protein | BK654_21845 | Not Available | Positive | 4930321 - 4931055 | 26830.8 |
| exopolyphosphatase | BK654_21850 | Not Available | Positive | 4931316 - 4932818 | 56280.6 |
| rna degradosome polyphosphate kinase | BK654_21855 | Not Available | Negative | 4932998 - 4935214 | 83136.5 |
| delta-aminolevulinic acid dehydratase | BK654_21860 | Not Available | Negative | 4935232 - 4936245 | 37072.4 |
| hypothetical protein | BK654_21865 | Not Available | Positive | 4936451 - 4937074 | 23365.0 |
| hypothetical protein | BK654_21870 | Not Available | Negative | 4937055 - 4938290 | 46817.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
