Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxidase | BK654_21670 | Not Available | Negative | 4893779 - 4894417 | 23937.3 |
| porin | BK654_21675 | Not Available | Negative | 4894708 - 4896090 | 49330.4 |
| amino-acid n-acetyltransferase | BK654_21680 | Not Available | Negative | 4896541 - 4897839 | 47711.3 |
| acetylornithine deacetylase | BK654_21685 | Not Available | Negative | 4897973 - 4899130 | 41526.2 |
| adenylate cyclase | BK654_21690 | Not Available | Positive | 4899289 - 4900656 | 52188.3 |
| type ii secretion system protein e | BK654_21695 | Not Available | Positive | 4901096 - 4902880 | 66303.8 |
| paraslipin | BK654_21700 | Not Available | Positive | 4903101 - 4904021 | 33281.6 |
| hypothetical protein | BK654_21705 | Not Available | Positive | 4904031 - 4904480 | 16756.7 |
| ribonucleotide reductase | BK654_21710 | Not Available | Positive | 4904549 - 4904866 | 10982.2 |
| glycine cleavage system protein h | BK654_21715 | Not Available | Negative | 4905047 - 4905430 | 13281.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
