Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | BK654_21420 | Not Available | Positive | 4841800 - 4842411 | 22441.7 |
| alpha/beta hydrolase | BK654_21425 | Not Available | Positive | 4842446 - 4843444 | 36619.4 |
| sulfurtransferase | BK654_21430 | Not Available | Negative | 4843562 - 4844416 | 30707.6 |
| tetr family transcriptional regulator | BK654_21435 | Not Available | Negative | 4844452 - 4845123 | 25837.0 |
| coniferyl-aldehyde dehydrogenase | BK654_21440 | Not Available | Positive | 4845272 - 4846702 | 52310.6 |
| twin-arginine translocation pathway signal protein | BK654_21445 | Not Available | Positive | 4846730 - 4847275 | 19248.2 |
| gmc family oxidoreductase | BK654_21450 | Not Available | Positive | 4847419 - 4849014 | 57390.7 |
| pantetheine-phosphate adenylyltransferase | BK654_21455 | Not Available | Positive | 4849130 - 4849609 | 17792.5 |
| ferredoxin | BK654_21460 | Not Available | Positive | 4849746 - 4849997 | 9332.96 |
| multidrug transporter | BK654_21465 | Not Available | Negative | 4850160 - 4850480 | 10815.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
