Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid dehydrogenase | BK654_21170 | Not Available | Negative | 4791136 - 4792377 | 44811.0 |
| lysr family transcriptional regulator | BK654_21175 | Not Available | Positive | 4792483 - 4793403 | 32770.7 |
| hemolysin iii | BK654_21180 | Not Available | Negative | 4793400 - 4794017 | 22621.4 |
| lysr family transcriptional regulator | BK654_21185 | Not Available | Positive | 4794178 - 4795092 | 34185.5 |
| malonate transporter subunit madm | BK654_21190 | Not Available | Negative | 4795230 - 4795994 | 25948.6 |
| malonate transporter subunit madl | BK654_21195 | Not Available | Negative | 4795996 - 4796412 | 14127.1 |
| malonate decarboxylase subunit epsilon | BK654_21200 | Not Available | Negative | 4796480 - 4797400 | 32320.3 |
| phosphoribosyl-dephospho-coa transferase | BK654_21205 | Not Available | Negative | 4797397 - 4798020 | 22911.6 |
| biotin-independent malonate decarboxylase subunit gamma | BK654_21210 | Not Available | Negative | 4798014 - 4798817 | 28355.0 |
| biotin-independent malonate decarboxylase subunit beta | BK654_21215 | Not Available | Negative | 4798814 - 4799665 | 30293.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
