Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylhomocysteinase | BK654_21120 | Not Available | Positive | 4777343 - 4778752 | 51292.9 |
| methylenetetrahydrofolate reductase | BK654_21125 | Not Available | Positive | 4778935 - 4779780 | 31433.2 |
| amino acid abc transporter substrate-binding protein | BK654_21130 | Not Available | Positive | 4779944 - 4780720 | 29281.5 |
| dead/deah box helicase | BK654_21135 | Not Available | Positive | 4780987 - 4782861 | 67793.6 |
| hypothetical protein | BK654_21140 | Not Available | Negative | 4783114 - 4783710 | 21048.8 |
| cytochrome b | BK654_21145 | Not Available | Negative | 4783743 - 4784294 | 20126.0 |
| amine oxidase | BK654_21150 | Not Available | Negative | 4785758 - 4787515 | 62431.8 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | BK654_21155 | Not Available | Positive | 4787740 - 4789146 | 52378.8 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | BK654_21160 | Not Available | Positive | 4789353 - 4790072 | 26410.9 |
| amino acid abc transporter substrate-binding protein | BK654_21165 | Not Available | Negative | 4790210 - 4791112 | 33201.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
