Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine transporter lyse | BK654_21070 | Not Available | Negative | 4767895 - 4768515 | 21922.4 |
| dna ligase b | BK654_21075 | Not Available | Positive | 4768724 - 4770397 | 62170.3 |
| hypothetical protein | BK654_21080 | Not Available | Positive | 4770489 - 4770893 | 14769.7 |
| cytochrome c | BK654_21085 | Not Available | Negative | 4770949 - 4771398 | 16530.8 |
| transglycosylase | BK654_21090 | Not Available | Positive | 4771524 - 4772711 | 42556.7 |
| hypothetical protein | BK654_21095 | Not Available | Negative | 4772864 - 4773247 | 14055.5 |
| eama family transporter | BK654_21100 | Not Available | Negative | 4773300 - 4774133 | 30710.3 |
| mfs transporter | BK654_21105 | Not Available | Positive | 4774328 - 4775488 | 39743.9 |
| hypothetical protein | BK654_21110 | Not Available | Negative | 4775536 - 4776417 | 32307.7 |
| acyl-coa thioesterase | BK654_21115 | Not Available | Negative | 4776620 - 4777021 | 15043.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
