Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | BK654_20770 | Not Available | Negative | 4694044 - 4695297 | 44605.2 |
| conjugal transfer protein trax | BK654_20775 | Not Available | Negative | 4695444 - 4696169 | 26597.5 |
| threonine aldolase | BK654_20780 | Not Available | Positive | 4696367 - 4697407 | 38071.0 |
| hybrid-cluster nad(p)-dependent oxidoreductase | BK654_20785 | Not Available | Negative | 4697628 - 4698728 | 40591.6 |
| rieske (2fe-2s) protein | BK654_20790 | Not Available | Positive | 4699013 - 4700308 | 48832.4 |
| metallophosphoesterase | BK654_20795 | Not Available | Negative | 4700411 - 4701655 | 46596.1 |
| hypothetical protein | BK654_20800 | Not Available | Negative | 4701683 - 4703551 | 69938.5 |
| choline dehydrogenase | BK654_20805 | Not Available | Negative | 4703714 - 4707166 | 126428.0 |
| gnat family n-acetyltransferase | BK654_20810 | Not Available | Negative | 4708286 - 4708852 | 21046.1 |
| electron transfer flavoprotein subunit beta | BK654_20815 | Not Available | Negative | 4709171 - 4709941 | 26773.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
