Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_20720 | Not Available | Negative | 4682528 - 4683106 | 18984.8 |
| hypothetical protein | BK654_20725 | Not Available | Positive | 4683414 - 4683716 | 11039.0 |
| hypothetical protein | BK654_20730 | Not Available | Positive | 4684468 - 4685043 | 20696.6 |
| cold-shock protein | BK654_20735 | Not Available | Positive | 4685340 - 4685552 | 7737.24 |
| formaldehyde dehydrogenase, glutathione-independent | BK654_20740 | Not Available | Negative | 4686126 - 4687325 | 42163.8 |
| formyltetrahydrofolate deformylase | BK654_20745 | Not Available | Negative | 4687550 - 4688407 | 32321.6 |
| sarcosine oxidase subunit gamma | BK654_20750 | Not Available | Negative | 4688614 - 4689246 | 22796.2 |
| sarcosine oxidase subunit alpha | BK654_20755 | Not Available | Negative | 4689414 - 4692431 | 109602.0 |
| sarcosine oxidase subunit delta | BK654_20760 | Not Available | Negative | 4692428 - 4692757 | 12476.5 |
| sarcosine oxidase subunit beta | BK654_20765 | Not Available | Negative | 4692772 - 4694022 | 45242.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
