Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | BK654_20620 | Not Available | Positive | 4660068 - 4660955 | 32739.9 |
| glycine cleavage system protein r | BK654_20625 | Not Available | Negative | 4661172 - 4661690 | 18816.7 |
| malate synthase g | BK654_20630 | Not Available | Positive | 4662135 - 4664312 | 78833.0 |
| response regulator | BK654_20635 | Not Available | Negative | 4664497 - 4664943 | 16173.8 |
| cyclic nucleotide-binding protein | BK654_20640 | Not Available | Positive | 4665202 - 4667136 | 72057.7 |
| dna polymerase iii subunit epsilon | BK654_20645 | Not Available | Positive | 4667133 - 4667840 | 26340.7 |
| rna polymerase subunit sigma | BK654_20650 | Not Available | Positive | 4668074 - 4668592 | 19403.6 |
| amino acid abc transporter substrate-binding protein | BK654_20655 | Not Available | Positive | 4668589 - 4669563 | 35925.1 |
| tonb-dependent receptor | BK654_20660 | Not Available | Positive | 4669797 - 4672235 | 88627.4 |
| peptidase | BK654_20665 | Not Available | Positive | 4672455 - 4673585 | 41740.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
