Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein pqqb | BK654_20520 | Not Available | Positive | 4636955 - 4637866 | 33118.6 |
| pyrroloquinoline quinone biosynthesis protein pqqc | BK654_20525 | Not Available | Positive | 4637957 - 4638709 | 28872.3 |
| pyrroloquinoline quinone biosynthesis protein pqqd | BK654_20530 | Not Available | Positive | 4638706 - 4638981 | 10354.3 |
| pyrroloquinoline quinone biosynthesis protein pqqe | BK654_20535 | Not Available | Positive | 4638953 - 4640122 | 43867.3 |
| s9 family peptidase | BK654_20540 | Not Available | Positive | 4640088 - 4641917 | 67450.6 |
| proteolipid membrane potential modulator | BK654_20545 | Not Available | Negative | 4642059 - 4642217 | 5717.51 |
| acyl-coa dehydrogenase | BK654_20550 | Not Available | Negative | 4642565 - 4644343 | 63835.0 |
| acyl-coa dehydrogenase | BK654_20555 | Not Available | Negative | 4644484 - 4646280 | 64605.8 |
| ggdef domain-containing protein | BK654_20560 | Not Available | Negative | 4646372 - 4647661 | 48039.8 |
| acyl-coa dehydrogenase | BK654_20565 | Not Available | Negative | 4647993 - 4649798 | 65613.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
