Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | BK654_20470 | Not Available | Negative | 4624060 - 4625415 | 48759.2 |
| serine kinase | BK654_20475 | Not Available | Negative | 4625441 - 4626526 | 40161.1 |
| gntr family transcriptional regulator | BK654_20480 | Not Available | Positive | 4626812 - 4627492 | 25400.7 |
| hypothetical protein | BK654_20485 | Not Available | Positive | 4627631 - 4630066 | 89978.8 |
| asnc family transcriptional regulator | BK654_20490 | Not Available | Positive | 4630102 - 4630563 | 16772.4 |
| transcriptional regulator | BK654_20495 | Not Available | Negative | 4630599 - 4630913 | 11829.3 |
| addiction module toxin rele | BK654_20500 | Not Available | Negative | 4630906 - 4631271 | 14208.7 |
| amine oxidase | BK654_20505 | Not Available | Positive | 4631635 - 4633317 | 62428.3 |
| carbon-nitrogen hydrolase | BK654_20510 | Not Available | Positive | 4633330 - 4634124 | 29101.7 |
| coenzyme pqq biosynthesis protein pqqf | BK654_20515 | Not Available | Positive | 4634212 - 4636641 | 89255.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
