Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin aldolase | BK654_20420 | Not Available | Negative | 4610777 - 4611130 | 13112.5 |
| glycerol-3-phosphate acyltransferase | BK654_20425 | Not Available | Positive | 4611205 - 4611774 | 20312.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | BK654_20430 | Not Available | Negative | 4611783 - 4612808 | 36504.4 |
| 30s ribosomal protein s21 | BK654_20435 | Not Available | Positive | 4613008 - 4613223 | 8386.25 |
| dna primase | BK654_20440 | Not Available | Positive | 4613706 - 4615664 | 72920.4 |
| rna polymerase sigma factor rpod | BK654_20445 | Not Available | Positive | 4615732 - 4617579 | 69342.0 |
| bifunctional diguanylate cyclase/phosphodiesterase | BK654_20450 | Not Available | Positive | 4617704 - 4621447 | 139582.0 |
| Trna-met | Not Available | Not Available | Positive | 4621463 - 4621539 | Not Available |
| d-amino-acid oxidase | BK654_20460 | Not Available | Negative | 4621762 - 4623087 | 47260.6 |
| haloacid dehalogenase, type ii | BK654_20465 | Not Available | Negative | 4623199 - 4623867 | 24836.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
