Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | BK654_20370 | Not Available | Positive | 4600115 - 4601104 | 35120.8 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | BK654_20375 | Not Available | Positive | 4601101 - 4601919 | 30027.2 |
| co2+/mg2+ efflux protein apag | BK654_20380 | Not Available | Positive | 4602034 - 4602414 | 13917.5 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | BK654_20385 | Not Available | Positive | 4602414 - 4603292 | 32860.4 |
| thiosulfate sulfurtransferase | BK654_20390 | Not Available | Positive | 4603327 - 4603656 | 11885.7 |
| prka family serine protein kinase | BK654_20395 | Not Available | Positive | 4603956 - 4605878 | 73818.7 |
| hypothetical protein | BK654_20400 | Not Available | Positive | 4605991 - 4607262 | 48639.7 |
| spovr family protein | BK654_20405 | Not Available | Positive | 4607259 - 4608824 | 61120.3 |
| multifunctional cca trna nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase | BK654_20410 | Not Available | Positive | 4608888 - 4610114 | 45787.1 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | BK654_20415 | Not Available | Negative | 4610268 - 4610786 | 19017.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
