Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter substrate-binding protein | BK654_20320 | Not Available | Negative | 4586558 - 4587601 | 37856.9 |
| spermidine/putrescine abc transporter atp-binding protein | BK654_20325 | Not Available | Negative | 4587651 - 4588775 | 41263.7 |
| dna-binding response regulator | BK654_20330 | Not Available | Negative | 4589124 - 4589753 | 22790.1 |
| histidine kinase | BK654_20335 | Not Available | Negative | 4589874 - 4592270 | 89854.1 |
| hydrolase or acyltransferase | BK654_20340 | Not Available | Positive | 4592345 - 4593340 | 35438.0 |
| molecular chaperone djla | BK654_20345 | Not Available | Negative | 4593391 - 4594158 | 28566.4 |
| mannose-1-phosphate guanylyltransferase | BK654_20350 | Not Available | Negative | 4594160 - 4594831 | 24208.1 |
| aminoglycoside phosphotransferase | BK654_20355 | Not Available | Negative | 4594828 - 4595853 | 38661.4 |
| lps biosynthesis protein | BK654_20360 | Not Available | Positive | 4595984 - 4598821 | 105943.0 |
| molecular chaperone sura | BK654_20365 | Not Available | Positive | 4598838 - 4600118 | 47321.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
