Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indole-3-glycerol-phosphate synthase | BK654_20270 | Not Available | Negative | 4574861 - 4575697 | 30611.1 |
| anthranilate phosphoribosyltransferase | BK654_20275 | Not Available | Negative | 4575694 - 4576743 | 37176.9 |
| anthranilate/aminodeoxychorismate synthase component ii | BK654_20280 | Not Available | Negative | 4576753 - 4577346 | 21793.3 |
| autotransporter outer membrane beta-barrel domain-containing protein | BK654_20285 | Not Available | Positive | 4577754 - 4579661 | 68423.9 |
| anthranilate synthase component i | BK654_20290 | Not Available | Negative | 4579799 - 4581280 | 54485.4 |
| phosphoglycolate phosphatase | BK654_20295 | Not Available | Negative | 4581351 - 4582169 | 29927.5 |
| ribulose-phosphate 3-epimerase | BK654_20300 | Not Available | Negative | 4582166 - 4582840 | 24060.2 |
| alcohol dehydrogenase | BK654_20305 | Not Available | Negative | 4582919 - 4584067 | 39838.5 |
| polyamine abc transporter permease | BK654_20310 | Not Available | Negative | 4584270 - 4585094 | 29544.2 |
| polyamine abc transporter substrate-binding protein | BK654_20315 | Not Available | Negative | 4585108 - 4586355 | 45719.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
