Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00701 family protein | BK654_20220 | Not Available | Positive | 4567266 - 4567697 | 16556.8 |
| 2-nitropropane dioxygenase | BK654_20225 | Not Available | Positive | 4567734 - 4568702 | 34370.3 |
| hypothetical protein | BK654_20230 | Not Available | Positive | 4568763 - 4569740 | 34893.5 |
| short-chain dehydrogenase | BK654_20235 | Not Available | Positive | 4569803 - 4570591 | 29005.7 |
| histidine triad nucleotide-binding protein | BK654_20240 | Not Available | Positive | 4570674 - 4571012 | 12768.5 |
| demethoxyubiquinone hydroxylase family protein | BK654_20245 | Not Available | Positive | 4571090 - 4571737 | 23970.7 |
| s-adenosylmethionine decarboxylase | BK654_20250 | Not Available | Negative | 4571828 - 4572622 | 30387.8 |
| peroxiredoxin | BK654_20255 | Not Available | Negative | 4572862 - 4573284 | 15136.5 |
| transcriptional regulator crp | BK654_20260 | Not Available | Positive | 4573514 - 4574158 | 24244.7 |
| lipoate--protein ligase | BK654_20265 | Not Available | Negative | 4574155 - 4574856 | 25241.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
