Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide bond formation protein dsba | BK654_20170 | Not Available | Negative | 4557194 - 4557784 | 21887.4 |
| glucose 1-dehydrogenase | BK654_20175 | Not Available | Negative | 4557819 - 4558547 | 26787.9 |
| tetr family transcriptional regulator | BK654_20180 | Not Available | Positive | 4558637 - 4559206 | 20924.2 |
| hypothetical protein | BK654_20185 | Not Available | Negative | 4559214 - 4559495 | 9677.8 |
| eama family transporter | BK654_20190 | Not Available | Negative | 4559664 - 4560551 | 30581.6 |
| tyrosine--trna ligase | BK654_20195 | Not Available | Negative | 4561590 - 4562789 | 44301.4 |
| peptidase m23 | BK654_20200 | Not Available | Positive | 4563001 - 4564422 | 51037.5 |
| anhydro-n-acetylmuramic acid kinase | BK654_20205 | Not Available | Positive | 4564426 - 4565517 | 38748.4 |
| iron-sulfur cluster insertion protein erpa | BK654_20210 | Not Available | Negative | 4565592 - 4565942 | 12559.6 |
| n-acetyl-gamma-glutamyl-phosphate reductase | BK654_20215 | Not Available | Negative | 4566097 - 4567131 | 36645.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
