Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_20120 | Not Available | Negative | 4549113 - 4549439 | 11230.3 |
| thiamine pyrophosphate-binding protein | BK654_20125 | Not Available | Negative | 4549436 - 4549978 | 19979.2 |
| peptidase | BK654_20130 | Not Available | Negative | 4549975 - 4551189 | 45297.9 |
| glyoxalase | BK654_20135 | Not Available | Negative | 4551421 - 4551882 | 16748.8 |
| redox-sensitive transcriptional activator soxr | BK654_20140 | Not Available | Negative | 4551969 - 4552439 | 17234.0 |
| antibiotic biosynthesis monooxygenase | BK654_20145 | Not Available | Positive | 4552535 - 4552900 | 14060.4 |
| hypothetical protein | BK654_20150 | Not Available | Positive | 4553017 - 4553283 | 9580.35 |
| lysine transporter lyse | BK654_20155 | Not Available | Positive | 4553386 - 4554000 | 22297.7 |
| iscs subfamily cysteine desulfurase | BK654_20160 | Not Available | Positive | 4554159 - 4555325 | 41104.9 |
| xaa-pro aminopeptidase | BK654_20165 | Not Available | Positive | 4555376 - 4557184 | 65838.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
