Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | BK654_20070 | Not Available | Positive | 4537679 - 4538389 | 26970.2 |
| methylisocitrate lyase | BK654_20075 | Not Available | Positive | 4538386 - 4539270 | 31831.1 |
| 2-methylcitrate synthase | BK654_20080 | Not Available | Positive | 4539327 - 4540454 | 41813.0 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | BK654_20085 | Not Available | Positive | 4540653 - 4543244 | 94238.8 |
| putative methylaconitate delta-isomerase prpf | BK654_20090 | Not Available | Positive | 4543297 - 4544490 | 41315.5 |
| metal abc transporter substrate-binding protein | BK654_20095 | Not Available | Negative | 4545027 - 4545929 | 31523.7 |
| zinc abc transporter permease | BK654_20100 | Not Available | Negative | 4545930 - 4546829 | 30835.1 |
| manganese abc transporter atp-binding protein | BK654_20105 | Not Available | Negative | 4546829 - 4547581 | 27296.3 |
| abc transporter substrate-binding protein | BK654_20110 | Not Available | Negative | 4547578 - 4548507 | 33754.5 |
| hypothetical protein | BK654_20115 | Not Available | Negative | 4548541 - 4549116 | 20481.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
