Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | BK654_19965 | Not Available | Positive | 4518041 - 4518862 | 28845.4 |
| suppressor of fused protein (sufu) | BK654_19975 | Not Available | Positive | 4520086 - 4520901 | 29284.5 |
| smi1/knr4 family protein | BK654_19980 | Not Available | Positive | 4520992 - 4521615 | 23297.2 |
| short-chain dehydrogenase | BK654_19985 | Not Available | Negative | 4521744 - 4522022 | 10067.0 |
| hypothetical protein | BK654_19990 | Not Available | Negative | 4522514 - 4522738 | 8466.95 |
| hybrid sensor histidine kinase/response regulator | BK654_19995 | Not Available | Positive | 4523031 - 4525220 | 79854.3 |
| hypothetical protein | BK654_20000 | Not Available | Positive | 4525377 - 4525562 | 6733.01 |
| hypothetical protein | BK654_20005 | Not Available | Positive | 4525883 - 4526293 | 12354.7 |
| hypothetical protein | BK654_20010 | Not Available | Positive | 4526657 - 4526860 | 7107.63 |
| hypothetical protein | BK654_20015 | Not Available | Negative | 4526918 - 4527214 | 10241.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
