Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | BK654_19915 | Not Available | Positive | 4509600 - 4509827 | 8030.93 |
| arac family transcriptional regulator | BK654_19920 | Not Available | Negative | 4509945 - 4510880 | 35882.2 |
| mfs transporter | BK654_19925 | Not Available | Positive | 4511434 - 4512783 | 48772.2 |
| fumarylacetoacetate hydrolase | BK654_19930 | Not Available | Positive | 4512885 - 4513577 | 24792.6 |
| 3-oxoacyl-acp reductase | BK654_19935 | Not Available | Positive | 4513620 - 4514378 | 26463.0 |
| dihydrofolate reductase | BK654_19940 | Not Available | Positive | 4514410 - 4515366 | 33446.5 |
| toxin-antitoxin toxin family protein | BK654_19945 | Not Available | Positive | 4515522 - 4515854 | 12616.3 |
| xre family transcriptional regulator | BK654_19950 | Not Available | Positive | 4515851 - 4516489 | 23143.4 |
| sam-dependent methyltransferase | BK654_19955 | Not Available | Positive | 4516559 - 4517329 | 28248.6 |
| gnat family n-acetyltransferase | BK654_19960 | Not Available | Positive | 4517406 - 4517975 | 22198.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
