Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide abc transporter atp-binding protein dppd | BK654_01720 | Not Available | Negative | 369348 - 370352 | 35328.1 |
| gntr family transcriptional regulator | BK654_01725 | Not Available | Negative | 370349 - 371086 | 27355.5 |
| lysr family transcriptional regulator | BK654_01730 | Not Available | Negative | 371710 - 372621 | 32824.4 |
| ester cyclase | BK654_01735 | Not Available | Positive | 372713 - 373153 | 16104.2 |
| alcohol dehydrogenase | BK654_01740 | Not Available | Positive | 373174 - 374094 | 31844.1 |
| short chain oxidoreductase | BK654_01745 | Not Available | Positive | 374110 - 375096 | 35311.8 |
| lysr family transcriptional regulator | BK654_01750 | Not Available | Negative | 375236 - 376126 | 32999.1 |
| spermidine/putrescine abc transporter substrate-binding protein potf | BK654_01755 | Not Available | Positive | 376276 - 377364 | 39506.8 |
| hypothetical protein | BK654_01760 | Not Available | Positive | 377374 - 378153 | 29222.8 |
| lysr family transcriptional regulator | BK654_01765 | Not Available | Negative | 378612 - 379523 | 33838.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
