Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | BK654_19715 | Not Available | Positive | 4470466 - 4471284 | 29591.6 |
| sugar abc transporter substrate-binding protein | BK654_19720 | Not Available | Positive | 4471459 - 4472463 | 36025.4 |
| l-arabinose abc transporter atp-binding protein arag | BK654_19725 | Not Available | Positive | 4472540 - 4474084 | 55762.1 |
| l-arabinose abc transporter permease arah | BK654_19730 | Not Available | Positive | 4474095 - 4475063 | 34070.1 |
| termination factor rho | BK654_19735 | Not Available | Negative | 4475444 - 4475824 | 14020.5 |
| hypothetical protein | BK654_19740 | Not Available | Negative | 4475857 - 4476201 | 11041.5 |
| gnat family n-acetyltransferase | BK654_19745 | Not Available | Positive | 4476379 - 4476861 | 17954.3 |
| glutathione s-transferase | BK654_19750 | Not Available | Negative | 4476867 - 4477499 | 23634.2 |
| 2-dehydro-3-deoxygalactonokinase | BK654_19755 | Not Available | Positive | 4477686 - 4478669 | 34767.7 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | BK654_19760 | Not Available | Positive | 4478689 - 4479309 | 21231.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
