Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtmp kinase | BK654_19665 | Not Available | Positive | 4462239 - 4462871 | 23009.9 |
| dna polymerase iii subunit delta' | BK654_19670 | Not Available | Positive | 4462864 - 4463850 | 35986.7 |
| pilus assembly protein pilz | BK654_19675 | Not Available | Positive | 4463893 - 4464249 | 12833.6 |
| hydrolase tatd | BK654_19680 | Not Available | Positive | 4464261 - 4465055 | 29076.5 |
| tetr family transcriptional regulator | BK654_19685 | Not Available | Positive | 4465441 - 4466079 | 24985.0 |
| radical sam protein | BK654_19690 | Not Available | Positive | 4466216 - 4467184 | 35281.2 |
| duf4823 domain-containing protein | BK654_19695 | Not Available | Positive | 4467255 - 4467860 | 22335.7 |
| proteophosphoglycan precursor | BK654_19700 | Not Available | Positive | 4467876 - 4468436 | 20845.0 |
| gntr family transcriptional regulator | BK654_19705 | Not Available | Positive | 4468611 - 4469357 | 27209.6 |
| gluconolaconase | BK654_19710 | Not Available | Positive | 4469354 - 4470229 | 31645.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
