Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-tyrosine-phosphatase | BK654_19565 | Not Available | Positive | 4441254 - 4441718 | 17015.3 |
| udp-n-acetylenolpyruvoylglucosamine reductase | BK654_19570 | Not Available | Positive | 4441715 - 4442734 | 37267.6 |
| (2fe-2s)-binding protein | BK654_19575 | Not Available | Positive | 4443002 - 4443472 | 16561.0 |
| acylaldehyde oxidase | BK654_19580 | Not Available | Positive | 4443469 - 4445784 | 83491.8 |
| hypothetical protein | BK654_19585 | Not Available | Positive | 4445784 - 4446755 | 35399.9 |
| molybdopterin-guanine dinucleotide biosynthesis protein moba | BK654_19590 | Not Available | Positive | 4446776 - 4447366 | 20486.8 |
| ribonuclease e | BK654_19595 | Not Available | Negative | 4447592 - 4450777 | 116377.0 |
| 23s rrna pseudouridine(955/2504/2580) synthase | BK654_19600 | Not Available | Positive | 4451486 - 4452442 | 35581.5 |
| had family hydrolase | BK654_19605 | Not Available | Positive | 4452432 - 4453094 | 24504.1 |
| s49 family peptidase | BK654_19610 | Not Available | Positive | 4453115 - 4454104 | 35644.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
