Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | BK654_19515 | Not Available | Positive | 4431885 - 4432508 | 23261.7 |
| abc transporter | BK654_19520 | Not Available | Positive | 4432642 - 4433574 | 34419.8 |
| abc transporter permease | BK654_19525 | Not Available | Positive | 4433571 - 4434350 | 28564.0 |
| atp-binding protein | BK654_19530 | Not Available | Negative | 4435209 - 4435724 | 19833.7 |
| dna internalization-related competence protein comec/rec2 | BK654_19535 | Not Available | Positive | 4435870 - 4438116 | 81341.0 |
| biopolymer transporter exbb | BK654_19540 | Not Available | Positive | 4438183 - 4438848 | 23887.6 |
| biopolymer transporter exbd | BK654_19545 | Not Available | Positive | 4438845 - 4439273 | 15362.5 |
| tetraacyldisaccharide 4'-kinase | BK654_19550 | Not Available | Positive | 4439273 - 4440283 | 37412.2 |
| hypothetical protein | BK654_19555 | Not Available | Positive | 4440308 - 4440493 | 6616.16 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | BK654_19560 | Not Available | Positive | 4440490 - 4441254 | 27713.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
