Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate--coa ligase subunit alpha | BK654_19215 | Not Available | Positive | 4373162 - 4374046 | 30168.8 |
| branched-chain amino acid transport system ii carrier protein | BK654_19220 | Not Available | Positive | 4374446 - 4375759 | 45250.9 |
| hypothetical protein | BK654_19225 | Not Available | Positive | 4376043 - 4376780 | 27624.9 |
| hypothetical protein | BK654_19230 | Not Available | Negative | 4376850 - 4377098 | 8668.04 |
| thioesterase | BK654_19235 | Not Available | Positive | 4377256 - 4377732 | 17177.8 |
| thioesterase | BK654_19240 | Not Available | Positive | 4377729 - 4378190 | 16615.0 |
| molecular chaperone htpg | BK654_19245 | Not Available | Positive | 4378278 - 4380182 | 71427.7 |
| dienelactone hydrolase | BK654_19250 | Not Available | Positive | 4380252 - 4380980 | 25854.0 |
| hypothetical protein | BK654_19255 | Not Available | Negative | 4381140 - 4382000 | 31258.2 |
| 5-oxo-l-prolinase | BK654_19260 | Not Available | Positive | 4382126 - 4383136 | 38582.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
