Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation acetate symporter | BK654_19165 | Not Available | Positive | 4359119 - 4360777 | 58609.1 |
| citrate (si)-synthase | BK654_19170 | Not Available | Negative | 4361008 - 4362297 | 47758.9 |
| succinate dehydrogenase, cytochrome b556 subunit | BK654_19175 | Not Available | Positive | 4362662 - 4363036 | 13426.1 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | BK654_19180 | Not Available | Positive | 4363030 - 4363398 | 13480.7 |
| succinate dehydrogenase flavoprotein subunit | BK654_19185 | Not Available | Positive | 4363402 - 4365174 | 63530.6 |
| succinate dehydrogenase iron-sulfur subunit | BK654_19190 | Not Available | Positive | 4365186 - 4365890 | 26053.6 |
| 2-oxoglutarate dehydrogenase e1 component | BK654_19195 | Not Available | Positive | 4366153 - 4368984 | 106254.0 |
| dihydrolipoamide succinyltransferase | BK654_19200 | Not Available | Positive | 4369028 - 4370251 | 42279.1 |
| dihydrolipoyl dehydrogenase | BK654_19205 | Not Available | Positive | 4370363 - 4371799 | 49765.3 |
| succinate--coa ligase subunit beta | BK654_19210 | Not Available | Positive | 4371996 - 4373162 | 41286.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
