Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine hydrolase | BK654_19010 | Not Available | Negative | 4328984 - 4329574 | 20940.3 |
| ribosomal protein l3 n(5)-glutamine methyltransferase | BK654_19015 | Not Available | Positive | 4329829 - 4330737 | 34156.5 |
| hypothetical protein | BK654_19020 | Not Available | Negative | 4330912 - 4331700 | 30168.0 |
| alpha/beta hydrolase | BK654_19025 | Not Available | Negative | 4331809 - 4332774 | 34159.6 |
| chorismate synthase | BK654_19030 | Not Available | Positive | 4332917 - 4334008 | 39063.6 |
| mfs transporter | BK654_19035 | Not Available | Positive | 4334043 - 4335188 | 42158.3 |
| methylthioribulose-1-phosphate dehydratase | BK654_19040 | Not Available | Positive | 4335185 - 4335805 | 23098.4 |
| acireductone dioxygenase | BK654_19045 | Not Available | Positive | 4335824 - 4336369 | 20544.1 |
| 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | BK654_19050 | Not Available | Positive | 4336374 - 4337057 | 24531.9 |
| hypothetical protein | BK654_19055 | Not Available | Negative | 4337177 - 4337455 | 10404.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
