Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | BK654_18860 | Not Available | Negative | 4299428 - 4300273 | 31152.6 |
| nucleotide pyrophosphatase | BK654_18865 | Not Available | Negative | 4300270 - 4301076 | 29987.4 |
| abc transporter substrate-binding protein | BK654_18870 | Not Available | Negative | 4301229 - 4302296 | 38149.6 |
| mfs transporter | BK654_18875 | Not Available | Positive | 4302646 - 4303377 | 27515.2 |
| hypothetical protein | BK654_18880 | Not Available | Negative | 4303385 - 4303567 | 6561.57 |
| m18 family aminopeptidase | BK654_18885 | Not Available | Negative | 4303834 - 4305123 | 47021.8 |
| rna pseudouridine synthase | BK654_18890 | Not Available | Negative | 4305378 - 4306013 | 24028.8 |
| cell division topological specificity factor mine | BK654_18895 | Not Available | Negative | 4306119 - 4306373 | 9482.39 |
| septum site-determining protein mind | BK654_18900 | Not Available | Negative | 4306373 - 4307185 | 29420.4 |
| septum site-determining protein minc | BK654_18905 | Not Available | Negative | 4307387 - 4308124 | 26143.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
