Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate phosphodiesterase | BK654_18810 | Not Available | Negative | 4287543 - 4289330 | 66281.8 |
| tail-specific protease | BK654_18815 | Not Available | Negative | 4289461 - 4291572 | 79028.7 |
| nad(p)h-quinone oxidoreductase | BK654_18820 | Not Available | Positive | 4291679 - 4292641 | 33432.3 |
| hypothetical protein | BK654_18825 | Not Available | Positive | 4292933 - 4293568 | 22809.9 |
| hypothetical protein | BK654_18830 | Not Available | Positive | 4293568 - 4294356 | 28666.8 |
| hypothetical protein | BK654_18835 | Not Available | Negative | 4294538 - 4295554 | 37643.5 |
| hypothetical protein | BK654_18840 | Not Available | Positive | 4296380 - 4296622 | 8977.54 |
| had family hydrolase | BK654_18845 | Not Available | Negative | 4296967 - 4297620 | 24478.2 |
| spermidine/putrescine abc transporter atp-binding protein | BK654_18850 | Not Available | Negative | 4297655 - 4298644 | 36288.9 |
| abc transporter permease | BK654_18855 | Not Available | Negative | 4298641 - 4299441 | 29359.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
