Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BK654_18705 | Not Available | Positive | 4267838 - 4269031 | 41634.2 |
| cupin | BK654_18710 | Not Available | Positive | 4269111 - 4269422 | 11552.7 |
| c4-dicarboxylate abc transporter | BK654_18715 | Not Available | Positive | 4269526 - 4270674 | 41423.3 |
| glycerol acyltransferase | BK654_18720 | Not Available | Positive | 4270755 - 4272629 | 68441.8 |
| qace family quaternary ammonium compound efflux smr transporter | BK654_18725 | Not Available | Negative | 4272736 - 4273050 | 10711.7 |
| sodium transporter | BK654_18730 | Not Available | Negative | 4273168 - 4274136 | 34559.4 |
| recombination-associated protein rdgc | BK654_18735 | Not Available | Negative | 4274281 - 4275201 | 34342.5 |
| Trna-val | Not Available | Not Available | Positive | 4275362 - 4275437 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 4275457 - 4275531 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 4275708 - 4275783 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
