Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | BK654_18605 | Not Available | Positive | 4246495 - 4247106 | 22487.3 |
| cobyrinic acid a,c-diamide synthase | BK654_18610 | Not Available | Positive | 4247118 - 4248515 | 49482.6 |
| 5,6-dimethylbenzimidazole synthase | BK654_18615 | Not Available | Positive | 4248512 - 4249162 | 24169.3 |
| cobalamin biosynthesis protein | BK654_18620 | Not Available | Positive | 4249159 - 4250067 | 32715.6 |
| threonine-phosphate decarboxylase | BK654_18625 | Not Available | Positive | 4250060 - 4251052 | 36496.2 |
| cobyric acid synthase cobq | BK654_18630 | Not Available | Positive | 4251049 - 4252500 | 51869.3 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | BK654_18635 | Not Available | Positive | 4252635 - 4253156 | 18875.1 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | BK654_18640 | Not Available | Positive | 4253153 - 4254208 | 36151.8 |
| histidine phosphatase family protein | BK654_18645 | Not Available | Positive | 4254205 - 4254780 | 20808.1 |
| adenosylcobinamide-gdp ribazoletransferase | BK654_18650 | Not Available | Positive | 4254783 - 4255511 | 25792.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
