Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacid dehydrogenase | BK654_18505 | Not Available | Negative | 4224396 - 4225385 | 35483.8 |
| hybrid sensor histidine kinase/response regulator | BK654_18510 | Not Available | Negative | 4225452 - 4228202 | 100688.0 |
| hypothetical protein | BK654_18515 | Not Available | Positive | 4228529 - 4228930 | 14739.0 |
| hypothetical protein | BK654_18520 | Not Available | Positive | 4229081 - 4229479 | 14589.5 |
| cysteine synthase b | BK654_18525 | Not Available | Positive | 4229716 - 4230618 | 32461.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase | BK654_18530 | Not Available | Positive | 4230618 - 4231988 | 49883.2 |
| gtp diphosphokinase | BK654_18535 | Not Available | Positive | 4232090 - 4234336 | 83927.1 |
| nucleoside triphosphate pyrophosphohydrolase | BK654_18540 | Not Available | Positive | 4234466 - 4235299 | 31655.4 |
| nucleoprotein/polynucleotide-associated enzyme | BK654_18545 | Not Available | Positive | 4235326 - 4235865 | 20591.6 |
| hypothetical protein | BK654_18550 | Not Available | Negative | 4236006 - 4236200 | 7437.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
