Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sprt family protein | BK654_18455 | Not Available | Negative | 4217842 - 4218336 | 19483.4 |
| hypothetical protein | BK654_18460 | Not Available | Negative | 4218510 - 4219112 | 21776.0 |
| trna 2-thiocytidine(32) synthetase ttca | BK654_18465 | Not Available | Positive | 4219540 - 4220364 | 31151.7 |
| 3-methyladenine dna glycosylase | BK654_18470 | Not Available | Positive | 4220446 - 4221120 | 25528.9 |
| hypothetical protein | BK654_18475 | Not Available | Negative | 4221210 - 4221635 | 15684.9 |
| nad(p)h:quinone oxidoreductase, type iv | BK654_18480 | Not Available | Negative | 4221628 - 4222233 | 21137.4 |
| arsenate reductase (glutaredoxin) | BK654_18485 | Not Available | Negative | 4222230 - 4222583 | 12881.8 |
| peroxiredoxin | BK654_18490 | Not Available | Positive | 4222700 - 4223167 | 17194.7 |
| meta domain-containing protein | BK654_18495 | Not Available | Negative | 4223370 - 4223774 | 15304.5 |
| hypothetical protein | BK654_18500 | Not Available | Negative | 4223774 - 4224208 | 15623.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
