Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | BK654_18205 | Not Available | Positive | 4158918 - 4159616 | 26150.7 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK654_18210 | Not Available | Positive | 4159673 - 4160437 | 27932.0 |
| arac family transcriptional regulator | BK654_18215 | Not Available | Positive | 4160551 - 4161531 | 36243.6 |
| bifunctional succinylornithine transaminase/acetylornithine transaminase | BK654_18220 | Not Available | Positive | 4161890 - 4163116 | 43418.9 |
| arginine/ornithine succinyltransferase subunit alpha | BK654_18225 | Not Available | Positive | 4163346 - 4164365 | 37018.9 |
| arginine n-succinyltransferase | BK654_18230 | Not Available | Positive | 4164409 - 4165434 | 37266.6 |
| succinylglutamate-semialdehyde dehydrogenase | BK654_18235 | Not Available | Positive | 4165434 - 4166900 | 51567.7 |
| n-succinylarginine dihydrolase | BK654_18240 | Not Available | Positive | 4167030 - 4168376 | 48732.8 |
| topoisomerase ii | BK654_18245 | Not Available | Positive | 4168447 - 4168734 | 10542.2 |
| succinylglutamate desuccinylase | BK654_18250 | Not Available | Positive | 4168747 - 4169754 | 37437.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
