Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | BK654_18105 | Not Available | Positive | 4139313 - 4140938 | 58655.8 |
| peptidase m4 | BK654_18110 | Not Available | Negative | 4141018 - 4141323 | 10904.8 |
| glycerophosphodiester phosphodiesterase | BK654_18115 | Not Available | Negative | 4141473 - 4142600 | 41069.0 |
| duf2025 domain-containing protein | BK654_18120 | Not Available | Positive | 4142843 - 4143169 | 12224.7 |
| hypothetical protein | BK654_18125 | Not Available | Negative | 4143317 - 4144027 | 26152.1 |
| lysr family transcriptional regulator | BK654_18130 | Not Available | Positive | 4144105 - 4144989 | 32079.8 |
| hypothetical protein | BK654_18135 | Not Available | Positive | 4145046 - 4145576 | 19708.7 |
| tetr family transcriptional regulator | BK654_18140 | Not Available | Negative | 4145622 - 4146230 | 22788.4 |
| hydrolase | BK654_18145 | Not Available | Positive | 4146421 - 4147479 | 40054.5 |
| transcriptional regulator | BK654_18150 | Not Available | Negative | 4147500 - 4147817 | 11500.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
