Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | BK654_17755 | Not Available | Negative | 4069177 - 4070505 | 48975.8 |
| two-component sensor histidine kinase | BK654_17760 | Not Available | Negative | 4070502 - 4072406 | 70820.0 |
| amino acid abc transporter atp-binding protein | BK654_17765 | Not Available | Negative | 4072569 - 4073303 | 27043.0 |
| amino acid abc transporter permease | BK654_17770 | Not Available | Negative | 4073300 - 4073971 | 24536.0 |
| amino acid abc transporter permease | BK654_17775 | Not Available | Negative | 4073971 - 4074717 | 27729.5 |
| amino acid abc transporter substrate-binding protein | BK654_17780 | Not Available | Negative | 4074908 - 4075822 | 33182.0 |
| glycerol-3-phosphate dehydrogenase | BK654_17785 | Not Available | Negative | 4076267 - 4077805 | 57278.6 |
| deor family transcriptional regulator | BK654_17790 | Not Available | Negative | 4078133 - 4078888 | 27711.3 |
| glycerol kinase | BK654_17795 | Not Available | Negative | 4078974 - 4080479 | 55614.0 |
| aquaporin | BK654_17800 | Not Available | Negative | 4080555 - 4081406 | 29810.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
