Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_17705 | Not Available | Negative | 4057213 - 4057701 | 18221.7 |
| cold-shock protein | BK654_17710 | Not Available | Negative | 4057796 - 4058008 | 7722.09 |
| glycine cleavage system protein t | BK654_17715 | Not Available | Negative | 4058402 - 4059526 | 39965.5 |
| l-serine ammonia-lyase | BK654_17720 | Not Available | Negative | 4059566 - 4060942 | 48894.0 |
| glycine dehydrogenase (aminomethyl-transferring) | BK654_17725 | Not Available | Negative | 4061118 - 4063967 | 102372.0 |
| glycine cleavage system protein h | BK654_17730 | Not Available | Negative | 4063978 - 4064361 | 13897.0 |
| fis family transcriptional regulator | BK654_17735 | Not Available | Negative | 4064779 - 4066287 | 54670.1 |
| lysr family transcriptional regulator | BK654_17740 | Not Available | Negative | 4066507 - 4067412 | 33363.3 |
| mbl fold metallo-hydrolase | BK654_17745 | Not Available | Positive | 4067525 - 4068403 | 31593.0 |
| 3-beta hydroxysteroid dehydrogenase | BK654_17750 | Not Available | Positive | 4068471 - 4069085 | 21862.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
