Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine aminotransferase | BK654_17655 | Not Available | Positive | 4045282 - 4046406 | 39816.9 |
| aspartate aminotransferase family protein | BK654_17660 | Not Available | Positive | 4046384 - 4047724 | 49283.8 |
| amidase | BK654_17665 | Not Available | Positive | 4047727 - 4049142 | 51219.8 |
| eama family transporter | BK654_17670 | Not Available | Negative | 4049149 - 4050060 | 32962.7 |
| mfs transporter | BK654_17675 | Not Available | Negative | 4050130 - 4051317 | 42441.4 |
| copper resistance protein copd | BK654_17680 | Not Available | Negative | 4051599 - 4052510 | 32760.7 |
| copper resistance protein copc | BK654_17685 | Not Available | Negative | 4052515 - 4052901 | 13341.4 |
| copper resistance protein copb | BK654_17690 | Not Available | Negative | 4052955 - 4053833 | 32106.4 |
| copper oxidase | BK654_17695 | Not Available | Negative | 4053845 - 4055620 | 66050.9 |
| quinolinate synthase | BK654_17700 | Not Available | Positive | 4055949 - 4057007 | 38288.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
