Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing sensor histidine kinase | BK654_17505 | Not Available | Negative | 4018442 - 4020478 | 75596.1 |
| 2-dehydropantoate 2-reductase | BK654_17510 | Not Available | Negative | 4020525 - 4021442 | 33044.4 |
| yajq family cyclic di-gmp-binding protein | BK654_17515 | Not Available | Positive | 4021586 - 4022065 | 17933.8 |
| mechanosensitive ion channel protein mscs | BK654_17520 | Not Available | Positive | 4022263 - 4023105 | 30400.3 |
| porin | BK654_17525 | Not Available | Negative | 4023272 - 4024555 | 46432.8 |
| hit family protein | BK654_17530 | Not Available | Positive | 4025443 - 4025868 | 16161.2 |
| hypothetical protein | BK654_17535 | Not Available | Positive | 4025872 - 4026078 | 7988.44 |
| cold-shock protein | BK654_17540 | Not Available | Negative | 4026150 - 4026755 | 21895.8 |
| dna starvation/stationary phase protection protein | BK654_17545 | Not Available | Positive | 4027151 - 4027624 | 17822.4 |
| hypothetical protein | BK654_17550 | Not Available | Positive | 4027833 - 4028177 | 12923.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
