Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropyrimidine dehydrogenase subunit b | BK654_17450 | Not Available | Positive | 4006318 - 4007592 | 45936.9 |
| tetr family transcriptional regulator | BK654_17455 | Not Available | Negative | 4007736 - 4008356 | 23588.3 |
| hypothetical protein | BK654_17460 | Not Available | Negative | 4008641 - 4008994 | 12851.3 |
| hypothetical protein | BK654_17470 | Not Available | Positive | 4010478 - 4010810 | 12157.3 |
| rna-binding protein | BK654_17475 | Not Available | Negative | 4011167 - 4011622 | 16774.4 |
| preprotein translocase subunit seca | BK654_17480 | Not Available | Positive | 4011931 - 4014666 | 102749.0 |
| bifunctional ornithine acetyltransferase/n-acetylglutamate synthase | BK654_17485 | Not Available | Positive | 4014787 - 4016004 | 42282.7 |
| glutathione s-transferase | BK654_17490 | Not Available | Positive | 4016165 - 4016797 | 23234.9 |
| hypothetical protein | BK654_17495 | Not Available | Positive | 4016794 - 4017738 | 33976.5 |
| atp:cob(i)alamin adenosyltransferase | BK654_17500 | Not Available | Negative | 4017858 - 4018439 | 20785.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
