Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad/nad(p)-binding oxidoreductase | BK654_17400 | Not Available | Negative | 3993686 - 3995095 | 50642.2 |
| (2fe-2s)-binding protein | BK654_17405 | Not Available | Negative | 3995092 - 3995415 | 11985.4 |
| dna-binding response regulator | BK654_17410 | Not Available | Positive | 3995694 - 3996377 | 25416.9 |
| two-component sensor histidine kinase | BK654_17415 | Not Available | Positive | 3996355 - 3997740 | 51115.9 |
| hypothetical protein | BK654_17420 | Not Available | Negative | 3997749 - 3997997 | 9224.95 |
| helix-turn-helix transcriptional regulator | BK654_17425 | Not Available | Negative | 3998235 - 3999722 | 55255.0 |
| zn-dependent hydrolase | BK654_17430 | Not Available | Negative | 3999808 - 4001091 | 45096.3 |
| nitrate reductase | BK654_17435 | Not Available | Negative | 4001242 - 4002720 | 53006.6 |
| dihydropyrimidinase | BK654_17440 | Not Available | Positive | 4003329 - 4004768 | 52448.0 |
| dihydropyrimidine dehydrogenase | BK654_17445 | Not Available | Positive | 4004950 - 4006317 | 49199.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
