Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK654_17300 | Not Available | Negative | 3971390 - 3971839 | 16536.0 |
| hypothetical protein | BK654_17305 | Not Available | Negative | 3972225 - 3972509 | 10368.2 |
| hypothetical protein | BK654_17310 | Not Available | Positive | 3972636 - 3972866 | 8481.08 |
| hypothetical protein | BK654_17315 | Not Available | Positive | 3972955 - 3973191 | 8756.25 |
| chemotaxis protein | BK654_17320 | Not Available | Negative | 3973377 - 3974984 | 58127.9 |
| conjugal transfer protein trar | BK654_17325 | Not Available | Negative | 3975165 - 3975569 | 15487.2 |
| abc transporter | BK654_17330 | Not Available | Negative | 3975897 - 3976919 | 35514.6 |
| d-xylose abc transporter atp-binding protein | BK654_17335 | Not Available | Negative | 3976954 - 3978507 | 56189.7 |
| rhizopine-binding protein | BK654_17340 | Not Available | Negative | 3978582 - 3979508 | 33202.1 |
| oxidoreductase | BK654_17345 | Not Available | Negative | 3979855 - 3980907 | 38004.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
